Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m19 | N180_10050 | Not Available | Negative | 1828030 - 1829103 | 39829.4 |
| threonine aldolase | N180_10055 | Not Available | Negative | 1829112 - 1830227 | 41567.3 |
| endoribonuclease l-psp | N180_10060 | Not Available | Negative | 1830239 - 1830712 | 17179.8 |
| gluconate transporter | N180_10065 | Not Available | Negative | 1830722 - 1832035 | 46171.9 |
| beta-hexosaminidase | N180_10070 | Not Available | Negative | 1832044 - 1834365 | 88016.0 |
| hypothetical protein | N180_10075 | Not Available | Negative | 1834506 - 1835081 | 21204.6 |
| gmc family oxidoreductase | N180_10080 | Not Available | Negative | 1835086 - 1836765 | 62835.2 |
| hypothetical protein | N180_10085 | Not Available | Positive | 1836964 - 1837812 | 32827.7 |
| transcriptional regulator | N180_10090 | Not Available | Negative | 1837823 - 1838731 | 34885.8 |
| lauroyl acyltransferase | N180_10095 | Not Available | Negative | 1838791 - 1839672 | 35095.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

