Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7-carboxy-7-deazaguanine synthase | N180_16480 | Not Available | Negative | 1739320 - 1739943 | 23348.9 |
| (2fe-2s)-binding protein | N180_16485 | Not Available | Positive | 1740038 - 1740382 | 13051.9 |
| dna mismatch repair protein mutt | N180_16490 | Not Available | Negative | 1740418 - 1740819 | 15410.5 |
| hypothetical protein | N180_16495 | Not Available | Positive | 1741044 - 1741676 | 23894.7 |
| tonb-dependent receptor | N180_16500 | Not Available | Positive | 1741814 - 1744972 | 116586.0 |
| ap endonuclease | N180_16505 | Not Available | Positive | 1745010 - 1746353 | 49071.6 |
| aldo/keto reductase | N180_16510 | Not Available | Positive | 1746812 - 1747960 | 42279.0 |
| 5,10-methylene-tetrahydrofolate cyclohydrolase | N180_16515 | Not Available | Negative | 1748036 - 1748917 | 31549.4 |
| elongation factor 4 | N180_16520 | Not Available | Negative | 1748946 - 1750733 | 66976.2 |
| copper homeostasis protein cutc | N180_16525 | Not Available | Negative | 1750764 - 1751516 | 26933.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

