Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_16425 | Not Available | Negative | 1727302 - 1727919 | 22963.3 |
| electron transfer flavoprotein subunit alpha | N180_16430 | Not Available | Negative | 1727966 - 1728937 | 33767.6 |
| electron transfer flavoprotein subunit alpha | N180_16435 | Not Available | Negative | 1729029 - 1729766 | 26119.4 |
| hypothetical protein | N180_16440 | Not Available | Positive | 1729889 - 1730224 | 12691.7 |
| chromate transporter | N180_16445 | Not Available | Positive | 1730230 - 1731432 | 43826.4 |
| dna helicase | N180_16450 | Not Available | Negative | 1731497 - 1733071 | 58336.8 |
| rna methyltransferase | N180_16455 | Not Available | Positive | 1733307 - 1734077 | 27944.3 |
| mannose-1-phosphate guanylyltransferase | N180_16460 | Not Available | Negative | 1734074 - 1735165 | 40706.8 |
| d-arabinose 5-phosphate isomerase | N180_16465 | Not Available | Negative | 1735184 - 1736149 | 34521.0 |
| 2-dehydro-3-deoxyphosphogluconate aldolase | N180_16475 | Not Available | Positive | 1738432 - 1739250 | 29632.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

