Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | N180_14895 | Not Available | Negative | 1716404 - 1716907 | 19333.9 |
| malate dehydrogenase | N180_14900 | Not Available | Positive | 1717106 - 1718044 | 32893.1 |
| hypothetical protein | N180_14905 | Not Available | Positive | 1718045 - 1718500 | 16807.6 |
| dna gyrase subunit b | N180_14910 | Not Available | Negative | 1718569 - 1720527 | 72613.6 |
| outer membrane chaperone skp | N180_14915 | Not Available | Positive | 1720711 - 1721316 | 22110.0 |
| hypothetical protein | N180_16400 | Not Available | Positive | 1722172 - 1722711 | 19654.3 |
| type ii citrate synthase | N180_16405 | Not Available | Positive | 1722831 - 1724117 | 48328.1 |
| proline hydroxylase | N180_16410 | Not Available | Negative | 1724177 - 1724776 | 23146.4 |
| hypothetical protein | N180_16415 | Not Available | Negative | 1724846 - 1725967 | 43623.1 |
| na+ dependent nucleoside transporter domain-containing protein | N180_16420 | Not Available | Negative | 1725975 - 1727240 | 44951.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

