Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol peroxidase | N180_14845 | Not Available | Positive | 1704079 - 1704555 | 17209.5 |
| transketolase | N180_14850 | Not Available | Positive | 1704584 - 1705429 | 30814.5 |
| transketolase | N180_14855 | Not Available | Positive | 1705533 - 1706489 | 34599.7 |
| rna polymerase sigma factor | N180_14860 | Not Available | Positive | 1706493 - 1707053 | 21896.2 |
| hypothetical protein | N180_14865 | Not Available | Positive | 1707164 - 1707862 | 26429.0 |
| hypothetical protein | N180_14870 | Not Available | Positive | 1707915 - 1708361 | 17677.1 |
| hypothetical protein | N180_14875 | Not Available | Positive | 1708345 - 1708827 | 18388.8 |
| acetyl-coa carboxylase | N180_14880 | Not Available | Positive | 1709020 - 1711365 | 87947.0 |
| thioredoxin | N180_14885 | Not Available | Negative | 1711430 - 1711747 | 11533.0 |
| dna polymerase iii subunit alpha | N180_14890 | Not Available | Negative | 1711819 - 1716252 | 166754.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

