Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | N180_14795 | Not Available | Positive | 1690999 - 1691628 | 23830.8 |
| 4-hydroxybenzoate polyprenyltransferase | N180_14800 | Not Available | Positive | 1691636 - 1692502 | 32475.6 |
| oligoendopeptidase f | N180_14805 | Not Available | Positive | 1692601 - 1694220 | 61984.6 |
| amino acid permease | N180_14810 | Not Available | Positive | 1694276 - 1696237 | 72061.7 |
| atpase aaa | N180_14815 | Not Available | Positive | 1696682 - 1697845 | 44990.1 |
| hypothetical protein | N180_14820 | Not Available | Positive | 1697980 - 1698855 | 32201.1 |
| potassium transporter kup | N180_14825 | Not Available | Negative | 1698863 - 1700815 | 73118.8 |
| hypothetical protein | N180_14830 | Not Available | Positive | 1701100 - 1701561 | 17029.5 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | N180_14835 | Not Available | Positive | 1701653 - 1702264 | 22955.4 |
| peptidase m23 | N180_14840 | Not Available | Positive | 1702271 - 1703992 | 63427.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

