Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | N180_09475 | Not Available | Positive | 1644921 - 1645655 | 26045.7 |
| phosphonate abc transporter atp-binding protein | N180_09480 | Not Available | Positive | 1645652 - 1646404 | 28168.1 |
| oxidoreductase | N180_09485 | Not Available | Positive | 1646425 - 1647312 | 33779.5 |
| hypothetical protein | N180_09490 | Not Available | Negative | 1647326 - 1648381 | 38723.1 |
| hypothetical protein | N180_09495 | Not Available | Positive | 1648566 - 1649615 | 39013.3 |
| hupe / urej protein | N180_09500 | Not Available | Positive | 1649771 - 1650358 | 21912.6 |
| dna topoisomerase iv subunit a | N180_09505 | Not Available | Negative | 1650355 - 1653444 | 115662.0 |
| cytidine deaminase | N180_09510 | Not Available | Negative | 1653514 - 1654008 | 17988.7 |
| hypothetical protein | N180_09515 | Not Available | Positive | 1654275 - 1659308 | 185703.0 |
| membrane protein | N180_09520 | Not Available | Positive | 1659327 - 1661657 | 87791.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

