Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acp s-malonyltransferase | N180_16760 | Not Available | Negative | 124668 - 125552 | 31029.5 |
| gtp cyclohydrolase | N180_16765 | Not Available | Negative | 125597 - 126232 | 24168.1 |
| 6-pyruvoyl tetrahydrobiopterin synthase | N180_16770 | Not Available | Negative | 126244 - 126654 | 15905.8 |
| purine phosphorylase | N180_16775 | Not Available | Positive | 126840 - 127469 | 22900.4 |
| 1,4-dihydroxy-6-naphthoate synthase | N180_16780 | Not Available | Positive | 127504 - 128364 | 31675.3 |
| hypothetical protein | N180_16785 | Not Available | Negative | 128371 - 128751 | 14126.8 |
| membrane protein | N180_16790 | Not Available | Negative | 128753 - 129985 | 45447.9 |
| metallo-beta-lactamase | N180_16795 | Not Available | Negative | 130017 - 130655 | 23594.0 |
| shikimate dehydrogenase | N180_16800 | Not Available | Negative | 130706 - 131449 | 27858.4 |
| phosphosulfolactate synthase | N180_16805 | Not Available | Negative | 131459 - 132226 | 28800.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

