Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxy-acid dehydratase | N180_09310 | Not Available | Positive | 1610396 - 1612096 | 60064.4 |
| acetohydroxyacid synthase small subunit | N180_09320 | Not Available | Positive | 1613869 - 1614471 | 23488.2 |
| hypothetical protein | N180_09325 | Not Available | Positive | 1614498 - 1614974 | 18225.0 |
| ketol-acid reductoisomerase | N180_09330 | Not Available | Positive | 1615009 - 1616490 | 54225.4 |
| isopropylmalate isomerase | N180_09335 | Not Available | Positive | 1616545 - 1617960 | 51073.1 |
| 3-isopropylmalate dehydratase | N180_09340 | Not Available | Positive | 1617996 - 1618580 | 21775.6 |
| molybdenum abc transporter atp-binding protein | N180_09345 | Not Available | Positive | 1618580 - 1620049 | 54912.7 |
| 3-isopropylmalate dehydrogenase | N180_09350 | Not Available | Positive | 1620128 - 1621219 | 39652.6 |
| 2-isopropylmalate synthase | N180_09355 | Not Available | Positive | 1621228 - 1622736 | 54985.4 |
| threonine dehydratase | N180_09360 | Not Available | Positive | 1622756 - 1623988 | 45589.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

