Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | N180_09155 | Not Available | Negative | 1581908 - 1582963 | 40003.8 |
| hypothetical protein | N180_09160 | Not Available | Negative | 1582986 - 1583552 | 21784.7 |
| udp-galactose-4-epimerase | N180_09165 | Not Available | Negative | 1583553 - 1584575 | 37060.9 |
| nad-dependent dehydratase | N180_09170 | Not Available | Negative | 1584576 - 1585565 | 37424.7 |
| udp-glucose 6-dehydrogenase | N180_09175 | Not Available | Negative | 1585565 - 1586875 | 48112.0 |
| 3-deoxy-d-manno-octulosonic acid transferase | N180_09180 | Not Available | Positive | 1587010 - 1588230 | 46321.9 |
| ferrochelatase | N180_09185 | Not Available | Negative | 1588227 - 1589252 | 38182.1 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | N180_09190 | Not Available | Negative | 1589373 - 1590221 | 31912.1 |
| hypothetical protein | N180_09195 | Not Available | Negative | 1590301 - 1591326 | 38180.6 |
| phosphoribosyltransferase | N180_09200 | Not Available | Negative | 1591332 - 1591841 | 18990.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

