Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonyl-trna synthetase | N180_12905 | Not Available | Negative | 1560079 - 1562004 | 72935.1 |
| lysr family transcriptional regulator | N180_12910 | Not Available | Negative | 1562145 - 1563068 | 35459.9 |
| ribose 5-phosphate isomerase | N180_12920 | Not Available | Negative | 1563672 - 1564352 | 24543.7 |
| heme abc transporter | N180_12925 | Not Available | Negative | 1564517 - 1565545 | 38373.8 |
| hypothetical protein | N180_12930 | Not Available | Negative | 1565556 - 1566338 | 28990.7 |
| fe3+-siderophore abc transporter permease | N180_12935 | Not Available | Negative | 1566335 - 1567384 | 36248.0 |
| abc transporter substrate-binding protein | N180_12940 | Not Available | Negative | 1567377 - 1568240 | 30268.8 |
| hypothetical protein | N180_12945 | Not Available | Negative | 1568369 - 1569448 | 38392.4 |
| tonb-dependent receptor | N180_12950 | Not Available | Negative | 1569477 - 1571570 | 77476.3 |
| hypothetical protein | N180_09095 | Not Available | Negative | 1572854 - 1573048 | 7591.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

