Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| collagen-binding protein | N180_12850 | Not Available | Positive | 1546171 - 1549317 | 114753.0 |
| hypothetical protein | N180_12860 | Not Available | Negative | 1551191 - 1553620 | 90496.5 |
| transglycosylase | N180_12865 | Not Available | Positive | 1554055 - 1556505 | 93228.1 |
| hypothetical protein | N180_12870 | Not Available | Negative | 1556562 - 1556936 | 14139.1 |
| nuclease | N180_12875 | Not Available | Negative | 1556951 - 1557301 | 13756.9 |
| transcriptional regulator | N180_12880 | Not Available | Positive | 1557434 - 1558210 | 29478.3 |
| hypothetical protein | N180_12885 | Not Available | Positive | 1558320 - 1558733 | 15815.2 |
| 50s ribosomal protein l20 | N180_12890 | Not Available | Negative | 1558851 - 1559195 | 13028.1 |
| 50s ribosomal protein l35 | N180_12895 | Not Available | Negative | 1559269 - 1559469 | 7312.21 |
| translation initiation factor if-3 | N180_12900 | Not Available | Negative | 1559496 - 1560065 | 21506.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

