Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron-binding protein | N180_12750 | Not Available | Negative | 1519738 - 1519962 | 8096.63 |
| alanyl-trna synthetase | N180_12755 | Not Available | Positive | 1520112 - 1520234 | 4955.39 |
| hypothetical protein | N180_12760 | Not Available | Positive | 1520276 - 1520875 | 22136.9 |
| hydrolase | N180_12765 | Not Available | Negative | 1520895 - 1521512 | 23833.4 |
| dehydrogenase | N180_12770 | Not Available | Negative | 1521569 - 1522462 | 31819.7 |
| hypothetical protein | N180_12775 | Not Available | Negative | 1522475 - 1523122 | 23999.1 |
| rna polymerase sigma factor | N180_12780 | Not Available | Negative | 1523293 - 1523814 | 20354.3 |
| Trna-cys | Not Available | Not Available | Positive | 1524245 - 1524318 | Not Available |
| dna helicase | N180_12790 | Not Available | Positive | 1524444 - 1527815 | 130062.0 |
| hypothetical protein | N180_12795 | Not Available | Negative | 1527827 - 1528513 | 25389.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

