Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | N180_05365 | Not Available | Positive | 1466538 - 1467446 | 35370.5 |
| hydroxyacid dehydrogenase | N180_05370 | Not Available | Positive | 1467538 - 1468581 | 37767.2 |
| hypothetical protein | N180_05375 | Not Available | Positive | 1468739 - 1469203 | 17968.0 |
| hypothetical protein | N180_05380 | Not Available | Positive | 1469200 - 1469724 | 20444.3 |
| Trna-leu | Not Available | Not Available | Positive | 1469851 - 1469932 | Not Available |
| iron abc transporter | N180_05390 | Not Available | Negative | 1470029 - 1470826 | 30139.9 |
| phosphonate abc transporter atp-binding protein | N180_05395 | Not Available | Negative | 1470862 - 1471533 | 25026.2 |
| abc transporter permease | N180_05400 | Not Available | Negative | 1471551 - 1473941 | 88406.3 |
| cell division protein ftsx | N180_05405 | Not Available | Negative | 1473963 - 1476329 | 87917.8 |
| phosphonate abc transporter atp-binding protein | N180_05410 | Not Available | Negative | 1476335 - 1477033 | 25762.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

