Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | N180_05255 | Not Available | Positive | 1442146 - 1443864 | 63857.7 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | N180_05260 | Not Available | Positive | 1443874 - 1444563 | 25209.8 |
| histidine phosphotransferase | N180_05265 | Not Available | Negative | 1444633 - 1445010 | 14257.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | N180_05270 | Not Available | Negative | 1445032 - 1445529 | 18073.0 |
| protease iv | N180_05275 | Not Available | Positive | 1445581 - 1447350 | 64765.8 |
| hypothetical protein | N180_05280 | Not Available | Negative | 1447379 - 1448047 | 24153.4 |
| dna polymerase iv | N180_05285 | Not Available | Positive | 1448096 - 1449772 | 62581.0 |
| hypothetical protein | N180_05290 | Not Available | Positive | 1449793 - 1450395 | 23327.9 |
| phosphohistidine phosphatase | N180_05300 | Not Available | Positive | 1451433 - 1451936 | 18973.7 |
| amp nucleosidase | N180_05305 | Not Available | Negative | 1451933 - 1452793 | 31854.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

