Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short-chain dehydrogenase | N180_05200 | Not Available | Negative | 1432584 - 1433312 | 26007.8 |
| nadh:flavin oxidoreductase | N180_05205 | Not Available | Negative | 1433336 - 1434436 | 40436.8 |
| hypothetical protein | N180_05215 | Not Available | Positive | 1435148 - 1435618 | 17693.3 |
| hypothetical protein | N180_05220 | Not Available | Positive | 1435638 - 1436300 | 25526.4 |
| Trna-leu | Not Available | Not Available | Positive | 1436366 - 1436452 | Not Available |
| beta-lactamase | N180_05230 | Not Available | Negative | 1436512 - 1437273 | 28520.3 |
| gliding motility protein | N180_05235 | Not Available | Negative | 1437293 - 1437943 | 24140.9 |
| cell division protein ftsk | N180_05240 | Not Available | Negative | 1437959 - 1440634 | 99853.6 |
| pspc family transcriptional regulator | N180_05245 | Not Available | Negative | 1440706 - 1440927 | 8802.11 |
| orotidine 5'-phosphate decarboxylase | N180_05250 | Not Available | Negative | 1441046 - 1441876 | 30513.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

