Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna hydroxylase | N180_05095 | Not Available | Negative | 1407093 - 1407674 | 22504.0 |
| glycosyltransferase | N180_05100 | Not Available | Positive | 1407768 - 1409021 | 47600.6 |
| membrane protein | N180_05105 | Not Available | Negative | 1409039 - 1410433 | 51283.5 |
| multidrug transporter acrb | N180_05110 | Not Available | Negative | 1410516 - 1413674 | 114676.0 |
| hypothetical protein | N180_05115 | Not Available | Negative | 1413683 - 1414810 | 41163.7 |
| transcriptional regulator | N180_05120 | Not Available | Positive | 1415233 - 1415880 | 24304.0 |
| hypothetical protein | N180_05125 | Not Available | Negative | 1415892 - 1416125 | 9060.12 |
| antibiotic transporter | N180_05130 | Not Available | Negative | 1416466 - 1417848 | 49663.5 |
| asnc family transcriptional regulator | N180_05135 | Not Available | Positive | 1417972 - 1418469 | 18831.2 |
| peptidase | N180_05145 | Not Available | Positive | 1421065 - 1422177 | 41471.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

