Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | N180_11630 | Not Available | Negative | 83150 - 83512 | 14261.9 |
| cyclic nucleotide-binding protein | N180_11635 | Not Available | Negative | 83574 - 84155 | 22470.4 |
| nad-dependent dehydratase | N180_11640 | Not Available | Positive | 84324 - 85391 | 40043.8 |
| hypothetical protein | N180_11645 | Not Available | Positive | 85541 - 89722 | 157986.0 |
| tonb-dependent receptor | N180_11650 | Not Available | Positive | 89960 - 93085 | 114085.0 |
| carbohydrate-binding protein susd | N180_11655 | Not Available | Positive | 93097 - 94797 | 63303.6 |
| hypothetical protein | N180_11660 | Not Available | Positive | 94871 - 97294 | 91374.4 |
| hypothetical protein | N180_11665 | Not Available | Negative | 97399 - 98838 | 51063.7 |
| hypothetical protein | N180_11675 | Not Available | Positive | 100834 - 101745 | 34874.5 |
| Trna-tyr | Not Available | Not Available | Positive | 101815 - 101897 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

