Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | N180_14200 | Not Available | Positive | 1335197 - 1336468 | 45984.4 |
| hypothetical protein | N180_14205 | Not Available | Positive | 1336489 - 1339275 | 105949.0 |
| hypothetical protein | N180_14210 | Not Available | Negative | 1339437 - 1340132 | 26298.9 |
| 50s rrna methyltransferase | N180_14215 | Not Available | Negative | 1340175 - 1341227 | 39869.9 |
| pseudouridine synthase | N180_14220 | Not Available | Negative | 1341329 - 1342378 | 37989.8 |
| amidohydrolase | N180_14225 | Not Available | Positive | 1342570 - 1343739 | 43591.6 |
| 2-nitropropane dioxygenase | N180_14230 | Not Available | Positive | 1343741 - 1344697 | 33664.2 |
| acylphosphatase | N180_14235 | Not Available | Positive | 1344728 - 1345006 | 10672.8 |
| polysaccharide biosynthesis protein | N180_14240 | Not Available | Positive | 1345024 - 1346535 | 57643.6 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | N180_14245 | Not Available | Positive | 1346557 - 1346988 | 15682.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

