Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease bn | N180_10630 | Not Available | Positive | 1287052 - 1288077 | 37472.9 |
| molecular chaperone dnaj | N180_10635 | Not Available | Negative | 1288140 - 1288586 | 17093.4 |
| transcriptional regulator | N180_10645 | Not Available | Positive | 1288990 - 1289667 | 25655.3 |
| histidine kinase | N180_10650 | Not Available | Positive | 1289673 - 1291034 | 51082.3 |
| cation transporter | N180_10655 | Not Available | Positive | 1291104 - 1292396 | 49011.5 |
| cation transporter | N180_10665 | Not Available | Positive | 1293531 - 1296680 | 116373.0 |
| hypothetical protein | N180_10670 | Not Available | Positive | 1296905 - 1297153 | 9502.01 |
| cyclase | N180_10675 | Not Available | Positive | 1297153 - 1297848 | 25980.3 |
| hypothetical protein | N180_10680 | Not Available | Negative | 1297845 - 1298333 | 17846.3 |
| gtp-binding protein | N180_10685 | Not Available | Positive | 1298457 - 1299551 | 39943.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

