Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_10515 | Not Available | Negative | 1262851 - 1264140 | 48409.3 |
| cytochrome oxidase maturation protein | N180_10525 | Not Available | Positive | 1266643 - 1266831 | 7096.54 |
| bifunctional cbb3-type cytochrome c oxidase subunit i/ii | N180_10530 | Not Available | Positive | 1266900 - 1269011 | 80065.8 |
| hypothetical protein | N180_10535 | Not Available | Positive | 1269027 - 1269233 | 7968.61 |
| cytochrome c | N180_10540 | Not Available | Positive | 1269214 - 1270047 | 30684.3 |
| cytochrome c oxidase | N180_10545 | Not Available | Positive | 1270049 - 1271446 | 53114.6 |
| fixh family protein | N180_10550 | Not Available | Positive | 1271449 - 1271874 | 16096.7 |
| membrane protein | N180_10555 | Not Available | Positive | 1271871 - 1272545 | 24399.3 |
| coproporphyrinogen iii oxidase | N180_10560 | Not Available | Negative | 1272565 - 1273935 | 51831.2 |
| lactate dehydrogenase | N180_10565 | Not Available | Negative | 1273928 - 1274383 | 16603.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

