Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd ubiquinol oxidase subunit i | N180_10465 | Not Available | Negative | 1253679 - 1255007 | 48727.2 |
| nadh dehydrogenase | N180_10470 | Not Available | Negative | 1255101 - 1256414 | 48676.4 |
| hypothetical protein | N180_10475 | Not Available | Positive | 1256534 - 1257037 | 19261.0 |
| hypothetical protein | N180_10480 | Not Available | Negative | 1257058 - 1257795 | 28385.4 |
| transcriptional regulator | N180_10485 | Not Available | Positive | 1258017 - 1258670 | 24672.8 |
| permease | N180_10490 | Not Available | Positive | 1258676 - 1259509 | 28824.3 |
| membrane protein | N180_10495 | Not Available | Positive | 1259513 - 1259908 | 14099.8 |
| mfs transporter | N180_10500 | Not Available | Negative | 1259905 - 1261125 | 44185.2 |
| lysr family transcriptional regulator | N180_10505 | Not Available | Positive | 1261221 - 1262129 | 33949.9 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | N180_10510 | Not Available | Negative | 1262118 - 1262768 | 23697.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

