Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_10415 | Not Available | Negative | 1245393 - 1245845 | 16991.6 |
| prephenate dehydrogenase | N180_10420 | Not Available | Positive | 1245870 - 1247132 | 47239.8 |
| thioredoxin | N180_10425 | Not Available | Negative | 1247180 - 1247476 | 11030.6 |
| mfs transporter | N180_10430 | Not Available | Negative | 1247688 - 1248833 | 41509.1 |
| dna glycosylase | N180_10435 | Not Available | Negative | 1248859 - 1249359 | 19029.8 |
| rna-binding protein | N180_10440 | Not Available | Positive | 1249477 - 1250310 | 31289.6 |
| acetyltransferase | N180_10445 | Not Available | Negative | 1250399 - 1250890 | 18282.1 |
| hypothetical protein | N180_10450 | Not Available | Positive | 1251047 - 1251637 | 22127.1 |
| heme oxygenase | N180_10455 | Not Available | Negative | 1251605 - 1252393 | 30145.0 |
| cytochrome d ubiquinol oxidase subunit ii | N180_10460 | Not Available | Negative | 1252659 - 1253675 | 37816.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

