Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | N180_10305 | Not Available | Negative | 1228414 - 1228659 | 9149.1 |
| hypothetical protein | N180_10310 | Not Available | Negative | 1228755 - 1229288 | 21231.6 |
| cysteine desulfurase | N180_10315 | Not Available | Negative | 1229366 - 1230514 | 41991.3 |
| phosphoglucosamine mutase | N180_10320 | Not Available | Negative | 1230520 - 1231908 | 49906.4 |
| methyltransferase | N180_10325 | Not Available | Positive | 1232042 - 1232773 | 28934.7 |
| phospholipid phosphatase | N180_10330 | Not Available | Positive | 1232770 - 1233333 | 21513.9 |
| zinc/iron permease | N180_10335 | Not Available | Positive | 1233333 - 1234070 | 26977.7 |
| transcriptional regulator | N180_10340 | Not Available | Negative | 1234067 - 1234519 | 17135.1 |
| exonuclease | N180_10350 | Not Available | Negative | 1234692 - 1235633 | 35925.4 |
| dephospho-coa kinase | N180_10355 | Not Available | Negative | 1235630 - 1236232 | 22152.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

