Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | N180_19800 | Not Available | Positive | 1213725 - 1215083 | 51378.9 |
| rnd transporter | N180_19810 | Not Available | Positive | 1216286 - 1219459 | 114290.0 |
| phosphoribosylformylglycinamidine cyclo-ligase | N180_19815 | Not Available | Negative | 1219545 - 1220729 | 42645.0 |
| glutamine synthetase | N180_19820 | Not Available | Negative | 1220837 - 1223020 | 81663.9 |
| hypothetical protein | N180_19825 | Not Available | Positive | 1223231 - 1224118 | 32780.0 |
| hypothetical protein | N180_19830 | Not Available | Positive | 1224215 - 1224598 | 14731.5 |
| phosphodiesterase | N180_19840 | Not Available | Positive | 1225336 - 1225827 | 18440.4 |
| fructose 1,6-bisphosphatase | N180_19845 | Not Available | Positive | 1225850 - 1226884 | 37551.0 |
| ribonuclease hi | N180_19850 | Not Available | Negative | 1226929 - 1227402 | 17789.5 |
| secretory protein | N180_10300 | Not Available | Negative | 1227570 - 1228259 | 26173.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

