Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | N180_15865 | Not Available | Negative | 1154893 - 1156377 | 55944.9 |
| hypothetical protein | N180_15870 | Not Available | Positive | 1156443 - 1157054 | 23156.9 |
| hypothetical protein | N180_15875 | Not Available | Positive | 1157060 - 1158223 | 43233.9 |
| hypothetical protein | N180_15880 | Not Available | Positive | 1158240 - 1158854 | 22954.1 |
| biotin synthase | N180_15885 | Not Available | Positive | 1158881 - 1159891 | 37555.1 |
| adenosylmethionine-8-amino-7-oxononanoate aminotransferase | N180_15890 | Not Available | Positive | 1159875 - 1161146 | 47324.8 |
| hypothetical protein | N180_15895 | Not Available | Negative | 1161396 - 1163837 | 90498.9 |
| hypothetical protein | N180_15900 | Not Available | Negative | 1163947 - 1165503 | 57316.1 |
| cold-shock protein | N180_15910 | Not Available | Negative | 1166029 - 1166220 | 6946.22 |
| hypothetical protein | N180_15915 | Not Available | Negative | 1166298 - 1167461 | 43633.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

