Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter antarcticus |
| Strain | 4BY |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1363681 bp
Thymine Count
1358158 bp
Guanine Count
897383 bp
Cytosine Count
947093 bp
Genome Length
4566318 bp
Protein-coding Genes
3816 genes
Non-Coding Genes
74 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa synthetase | N180_11520 | Not Available | Positive | 62969 - 64864 | 70165.2 |
| hypothetical protein | N180_11525 | Not Available | Negative | 64915 - 65628 | 26809.3 |
| general stress protein csbd | N180_11530 | Not Available | Positive | 65785 - 65970 | 7176.45 |
| peptidase m16 | N180_11535 | Not Available | Negative | 66386 - 69319 | 110166.0 |
| stationary phase survival protein sure | N180_11540 | Not Available | Positive | 69522 - 70301 | 28250.6 |
| lipid-a-disaccharide synthase | N180_11545 | Not Available | Positive | 70343 - 71473 | 42009.4 |
| transcriptional regulator | N180_11550 | Not Available | Negative | 71508 - 71885 | 14357.3 |
| 3-hexulose-6-phosphate synthase | N180_11555 | Not Available | Negative | 72011 - 72643 | 21281.8 |
| hypothetical protein | N180_11560 | Not Available | Negative | 72666 - 73286 | 22154.9 |
| hypothetical protein | N180_11570 | Not Available | Negative | 74346 - 74705 | 13667.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

