Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | ATN00_RS03935 | A5V9C3 | Positive | 778119 - 779213 | 39911.5 |
| peptide chain release factor n(5)-glutamine methyltransferase | ATN00_RS03940 | Q9A9T7 | Positive | 779225 - 780046 | 29370.6 |
| duf4167 domain-containing protein | ATN00_RS03945 | Not Available | Positive | 780352 - 781104 | 28313.0 |
| duf4139 domain-containing protein | ATN00_RS03950 | Not Available | Positive | 781250 - 782659 | 50325.3 |
| duf4139 domain-containing protein | ATN00_RS03955 | Not Available | Positive | 782731 - 784182 | 52122.0 |
| acyl-coa thioesterase | ATN00_RS03960 | P0A1A2 | Negative | 784198 - 784575 | 13643.6 |
| hypothetical protein | ATN00_RS03965 | Not Available | Negative | 784568 - 784867 | 11021.8 |
| cbs domain-containing protein | ATN00_RS03970 | Q9LEV3 | Positive | 784940 - 785368 | 15458.0 |
| lipopolysaccharide biosynthesis protein | ATN00_RS03975 | Not Available | Negative | 785378 - 786865 | 52948.6 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 787308 - 788794 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

