Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | ATN00_RS03790 | Q1GP62 | Negative | 743315 - 743956 | 23750.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | ATN00_RS03795 | A5VA83 | Negative | 743953 - 745803 | 65610.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | ATN00_RS03800 | A5VA82 | Negative | 745864 - 747147 | 44930.7 |
| duf6489 family protein | ATN00_RS03805 | Not Available | Negative | 747148 - 747411 | 9242.2 |
| dienelactone hydrolase family protein | ATN00_RS03810 | Q43914 | Positive | 747561 - 748259 | 25297.2 |
| duf2155 domain-containing protein | ATN00_RS03815 | P43903 | Positive | 748272 - 749229 | 35106.9 |
| yjbe family putative metal transport protein | ATN00_RS03820 | O31603 | Negative | 749442 - 750161 | 25271.6 |
| transcription termination factor rho | ATN00_RS03825 | Q1RIJ6 | Negative | 750287 - 751543 | 46466.1 |
| retroviral-like aspartic protease family protein | ATN00_RS03830 | Not Available | Positive | 751817 - 752764 | 34048.7 |
| transglycosylase domain-containing protein | ATN00_RS03835 | P70997 | Negative | 752916 - 754997 | 74326.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

