Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome hibernation-promoting factor, hpf/yfia family | ATN00_RS03690 | P30334 | Positive | 724473 - 725060 | 21425.4 |
| pts sugar transporter subunit iia | ATN00_RS03695 | Not Available | Positive | 725199 - 725666 | 16166.5 |
| paai family thioesterase | ATN00_RS03700 | Not Available | Positive | 725671 - 726123 | 16521.6 |
| duf1491 family protein | ATN00_RS03705 | Not Available | Positive | 726113 - 726454 | 12150.5 |
| cell wall hydrolase | ATN00_RS03710 | Not Available | Positive | 726632 - 727294 | 22927.0 |
| mmcb family dna repair protein | ATN00_RS03715 | Not Available | Positive | 727387 - 727884 | 18304.8 |
| ankyrin repeat domain-containing protein | ATN00_RS03720 | Not Available | Negative | 727939 - 728556 | 22155.4 |
| sco family protein | ATN00_RS03725 | Q8VYP0 | Positive | 728601 - 729245 | 23121.7 |
| ycgn family cysteine cluster protein | ATN00_RS03730 | A5VA56 | Positive | 729250 - 729675 | 16309.2 |
| m48 family metallopeptidase | ATN00_RS03735 | Not Available | Positive | 729656 - 730369 | 25761.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

