Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnaj | ATN00_RS03640 | Not Available | Negative | 716578 - 717015 | 14939.7 |
| division plane positioning atpase mipz | ATN00_RS03645 | Not Available | Negative | 717015 - 717821 | 29558.5 |
| pantoate--beta-alanine ligase | ATN00_RS03650 | A5VA26 | Positive | 717932 - 718777 | 30384.7 |
| copd family protein | ATN00_RS03655 | Q53229 | Negative | 719049 - 719489 | 16787.3 |
| uroporphyrinogen decarboxylase | ATN00_RS03660 | Q1GP74 | Negative | 719489 - 720535 | 37505.2 |
| pyruvate, water dikinase regulatory protein | ATN00_RS03665 | Q2GC57 | Positive | 720823 - 721653 | 30954.1 |
| nucleoside triphosphate pyrophosphatase | ATN00_RS03670 | Q9AC58 | Positive | 721650 - 722243 | 21342.9 |
| shikimate dehydrogenase | ATN00_RS03675 | Q1GP77 | Positive | 722240 - 723064 | 29418.6 |
| dephospho-coa kinase | ATN00_RS03680 | Q2GC60 | Positive | 723075 - 723668 | 21672.8 |
| dna polymerase iii subunit epsilon | ATN00_RS03685 | Q1RJM1 | Positive | 723698 - 724399 | 25739.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

