Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase | ATN00_RS03590 | Not Available | Negative | 704542 - 705042 | 18221.8 |
| gtp cyclohydrolase ii | ATN00_RS03595 | P43525 | Negative | 705039 - 706103 | 37661.3 |
| exodeoxyribonuclease iii | ATN00_RS03600 | Not Available | Negative | 706103 - 706900 | 30505.3 |
| outer membrane lipoprotein carrier protein lola | ATN00_RS03605 | Not Available | Negative | 707309 - 707947 | 23062.9 |
| dna translocase ftsk 4tm domain-containing protein | ATN00_RS03610 | Q8YJB8 | Negative | 708395 - 710713 | 83942.4 |
| gnat family n-acetyltransferase | ATN00_RS03615 | P79081 | Negative | 710813 - 711301 | 17946.7 |
| dmt family transporter | ATN00_RS03620 | Not Available | Negative | 711312 - 712223 | 31954.2 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | ATN00_RS03625 | Q5NR50 | Negative | 712239 - 713384 | 40640.7 |
| ompp1/fadl family transporter | ATN00_RS03630 | Not Available | Negative | 713451 - 714752 | 46299.8 |
| phosphoglucomutase/phosphomannomutase pgmg | ATN00_RS03635 | P45632 | Negative | 715179 - 716546 | 49018.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

