Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter permease subunit | ATN00_RS03540 | Q44586 | Positive | 686291 - 689536 | 115920.0 |
| nad-dependent epimerase/dehydratase family protein | ATN00_RS03545 | Not Available | Positive | 689807 - 690883 | 38848.3 |
| gntr family transcriptional regulator | ATN00_RS03550 | Not Available | Negative | 690929 - 691627 | 25828.7 |
| tonb-dependent receptor | ATN00_RS03555 | Not Available | Positive | 691840 - 694128 | 81789.1 |
| malonic semialdehyde reductase | ATN00_RS03560 | Not Available | Positive | 694134 - 694736 | 22287.7 |
| rieske (2fe-2s) protein | ATN00_RS03565 | Q9XJ38 | Positive | 694740 - 695618 | 31164.4 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | ATN00_RS03570 | Not Available | Positive | 695632 - 696627 | 37466.1 |
| nadp-dependent malic enzyme | ATN00_RS03575 | O30808 | Negative | 696728 - 698989 | 81194.3 |
| dna mismatch repair protein muts | ATN00_RS03580 | A5VA00 | Positive | 699154 - 701763 | 92535.8 |
| [protein-pii] uridylyltransferase | ATN00_RS03585 | Q2GAJ4 | Positive | 701775 - 704537 | 104010.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

