Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate octaprenyltransferase | ATN00_RS03380 | Q16QL3 | Negative | 659845 - 660741 | 32356.4 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | ATN00_RS03385 | P44627 | Positive | 660829 - 661575 | 27132.8 |
| glutamate--cysteine ligase | ATN00_RS03390 | P46309 | Positive | 661676 - 663049 | 50762.2 |
| isoprenylcysteine carboxylmethyltransferase family protein | ATN00_RS03395 | Not Available | Negative | 663053 - 664354 | 48259.7 |
| duf1345 domain-containing protein | ATN00_RS03400 | Not Available | Negative | 664404 - 665027 | 22829.3 |
| holliday junction branch migration protein ruva | ATN00_RS03405 | Q1GWB4 | Positive | 665141 - 665749 | 20534.0 |
| holliday junction branch migration dna helicase ruvb | ATN00_RS03410 | A5V881 | Positive | 665746 - 666768 | 36973.7 |
| long-chain fatty acid--coa ligase | ATN00_RS03415 | O53521 | Positive | 666864 - 668642 | 64951.8 |
| hypothetical protein | ATN00_RS03420 | Not Available | Negative | 668902 - 669303 | 14266.6 |
| hydroxyacylglutathione hydrolase | ATN00_RS03425 | Q60BX0 | Negative | 669355 - 670089 | 25890.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

