Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATN00_RS03330 | Q165Y2 | Positive | 647928 - 648491 | 19605.9 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | ATN00_RS03335 | Q92M71 | Negative | 648496 - 649302 | 28347.7 |
| tldd/pmba family protein | ATN00_RS03340 | P0AFK1 | Negative | 649289 - 650635 | 46863.4 |
| nad(+) diphosphatase | ATN00_RS03345 | Q4R7L8 | Negative | 650680 - 651597 | 33172.7 |
| a/g-specific adenine glycosylase | ATN00_RS03350 | P17802 | Negative | 651584 - 652660 | 38824.5 |
| duf721 domain-containing protein | ATN00_RS03355 | Not Available | Positive | 652687 - 653229 | 19656.0 |
| thioredoxin domain-containing protein | ATN00_RS03360 | Not Available | Positive | 653418 - 654086 | 23952.9 |
| thioredoxin domain-containing protein | ATN00_RS03365 | Not Available | Positive | 654135 - 654872 | 26135.0 |
| chromosome segregation smc family protein | ATN00_RS03370 | Q6N1B7 | Positive | 654938 - 658381 | 121560.0 |
| phospholipase d-like domain-containing protein | ATN00_RS03375 | Not Available | Negative | 658391 - 659848 | 54745.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

