Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | ATN00_RS03230 | Q9C4M5 | Positive | 620667 - 621638 | 34321.8 |
| efflux transporter outer membrane subunit | ATN00_RS03235 | P15727 | Negative | 621660 - 623057 | 48159.9 |
| efflux rnd transporter periplasmic adaptor subunit | ATN00_RS03240 | P76185 | Negative | 623050 - 623952 | 32801.4 |
| duf1656 domain-containing protein | ATN00_RS03245 | Not Available | Negative | 623949 - 624164 | 7619.98 |
| fusc family protein | ATN00_RS03250 | C5BC09 | Negative | 624161 - 626212 | 73936.1 |
| marr family winged helix-turn-helix transcriptional regulator | ATN00_RS03255 | C5BE36 | Negative | 626209 - 626658 | 16680.2 |
| hypothetical protein | ATN00_RS03260 | Not Available | Negative | 626771 - 627073 | 10379.5 |
| pitrilysin family protein | ATN00_RS03265 | P55679 | Negative | 627098 - 629965 | 102912.0 |
| m28 family metallopeptidase | ATN00_RS03270 | Not Available | Positive | 630120 - 631748 | 57223.2 |
| atp-dependent chaperone clpb | ATN00_RS03275 | Q6N1H2 | Positive | 631864 - 634443 | 93776.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

