Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase family protein | ATN00_RS02930 | P23496 | Positive | 566197 - 567078 | 32572.7 |
| peptide chain release factor 3 | ATN00_RS02935 | B3RDA4 | Positive | 567124 - 568704 | 58102.2 |
| methionine biosynthesis protein metw | ATN00_RS02940 | Q7UG04 | Negative | 568717 - 569310 | 21921.3 |
| homoserine o-acetyltransferase | ATN00_RS02945 | Q5NR05 | Negative | 569307 - 570443 | 41202.1 |
| 2-hydroxyacid dehydrogenase | ATN00_RS02950 | Q65CJ7 | Positive | 570533 - 571483 | 33394.3 |
| histidinol-phosphate transaminase | ATN00_RS02955 | Q1GP30 | Positive | 571614 - 572711 | 38601.9 |
| prephenate/arogenate dehydrogenase family protein | ATN00_RS02960 | Q04983 | Positive | 572713 - 573618 | 32427.5 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | ATN00_RS02965 | Not Available | Negative | 573615 - 574319 | 25570.6 |
| ydcf family protein | ATN00_RS02970 | Not Available | Negative | 574330 - 574860 | 19835.6 |
| abc transporter permease | ATN00_RS02975 | Not Available | Negative | 574857 - 575762 | 31287.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

