Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf445 domain-containing protein | ATN00_RS02685 | P39385 | Positive | 518876 - 520141 | 45796.3 |
| energy transducer tonb | ATN00_RS02690 | Not Available | Positive | 520295 - 520987 | 23983.9 |
| hypothetical protein | ATN00_RS02695 | Not Available | Positive | 521069 - 521524 | 17350.8 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | ATN00_RS02700 | P25539 | Positive | 521581 - 522534 | 33988.1 |
| riboflavin synthase | ATN00_RS02705 | Q2YN92 | Positive | 522851 - 523465 | 21403.6 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | ATN00_RS02710 | P51962 | Positive | 523541 - 524842 | 46981.1 |
| 6,7-dimethyl-8-ribityllumazine synthase | ATN00_RS02715 | A5V939 | Positive | 524845 - 525267 | 14905.9 |
| alkene reductase | ATN00_RS02720 | P77258 | Negative | 525271 - 526350 | 38529.2 |
| dmt family transporter | ATN00_RS02725 | Not Available | Positive | 526419 - 527318 | 32017.5 |
| coq9 family protein | ATN00_RS02730 | Not Available | Positive | 527366 - 528022 | 23872.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

