Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ynce family protein | ATN00_RS02330 | Not Available | Negative | 441060 - 441989 | 32949.7 |
| allophanate hydrolase | ATN00_RS02335 | Q936X2 | Negative | 442017 - 443786 | 61506.2 |
| urea carboxylase | ATN00_RS02340 | A5H0J2 | Negative | 443783 - 447379 | 128844.0 |
| urea amidolyase associated protein uaap2 | ATN00_RS02345 | Not Available | Negative | 447376 - 448011 | 22545.7 |
| urea amidolyase associated protein uaap1 | ATN00_RS02350 | Not Available | Negative | 448029 - 448853 | 29343.2 |
| copg family ribbon-helix-helix protein | ATN00_RS02355 | Q30X46 | Negative | 448850 - 449302 | 17010.8 |
| abc transporter atp-binding protein | ATN00_RS02360 | P73265 | Negative | 449299 - 450096 | 28873.8 |
| abc transporter permease | ATN00_RS02365 | Q8YDR8 | Negative | 450093 - 450908 | 29443.5 |
| putative urea abc transporter substrate-binding protein | ATN00_RS02370 | Not Available | Negative | 450948 - 452030 | 37933.4 |
| duf2155 domain-containing protein | ATN00_RS02380 | Not Available | Positive | 452677 - 453417 | 26794.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

