Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent siderophore receptor | ATN00_RS02190 | Q9HUX3 | Positive | 404221 - 406359 | 77910.2 |
| pepsy domain-containing protein | ATN00_RS02195 | Not Available | Positive | 406377 - 407525 | 42193.1 |
| site-specific integrase | ATN00_RS02205 | P10487 | Negative | 407931 - 408893 | 35800.4 |
| molybdopterin-dependent oxidoreductase | ATN00_RS02210 | P81186 | Positive | 409476 - 411653 | 79369.7 |
| tonb-dependent siderophore receptor | ATN00_RS02215 | P16869 | Positive | 411761 - 413911 | 79085.5 |
| fatty acid desaturase family protein | ATN00_RS02220 | Not Available | Positive | 414280 - 415287 | 38999.7 |
| ompa family protein | ATN00_RS02225 | Not Available | Positive | 415861 - 416745 | 30612.1 |
| tetratricopeptide repeat protein | ATN00_RS02230 | Not Available | Negative | 416906 - 417637 | 26370.5 |
| tonb-dependent siderophore receptor | ATN00_RS02235 | Not Available | Negative | 417711 - 420194 | 88642.1 |
| type iv toxin-antitoxin system abiei family antitoxin domain-containing protein | ATN00_RS02240 | Not Available | Negative | 420254 - 420859 | 22065.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

