Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mobq family relaxase | ATN00_RS22625 | P20085 | Negative | 4629 - 5606 | 36870.4 |
| hypothetical protein | ATN00_RS21750 | Not Available | Positive | 91 - 678 | 21475.4 |
| atpase | ATN00_RS21755 | Not Available | Positive | 777 - 1796 | 35723.3 |
| 5-methylcytosine restriction system specificity protein mcrc | ATN00_RS21760 | Not Available | Positive | 1789 - 3072 | 46617.9 |
| imma/irre family metallo-endopeptidase | ATN00_RS21765 | Not Available | Negative | 3145 - 4026 | 33221.5 |
| helix-turn-helix domain-containing protein | ATN00_RS21770 | Not Available | Negative | 4026 - 4346 | 12107.2 |
| hypothetical protein | ATN00_RS21775 | Not Available | Positive | 4483 - 4698 | 7218.27 |
| duf3892 domain-containing protein | ATN00_RS21780 | Not Available | Positive | 4717 - 4980 | 9839.36 |
| duf6118 family protein | ATN00_RS21785 | Not Available | Negative | 5008 - 5715 | 25754.7 |
| ti-type conjugative transfer relaxase traa | ATN00_RS21790 | P55418 | Negative | 5749 - 8664 | 106781.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

