Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2235 domain-containing protein | ATN00_RS01785 | P39992 | Positive | 329276 - 330709 | 53621.5 |
| hypothetical protein | ATN00_RS23290 | Not Available | Negative | 330850 - 331347 | 18079.5 |
| hypothetical protein | ATN00_RS01795 | Not Available | Positive | 331605 - 332948 | 50108.7 |
| tyrosine-type recombinase/integrase | ATN00_RS01800 | Not Available | Negative | 333133 - 333765 | 24093.1 |
| type ii toxin-antitoxin system rele/pare family toxin | ATN00_RS01805 | Not Available | Positive | 333879 - 334169 | 10817.9 |
| higa family addiction module antitoxin | ATN00_RS01810 | Not Available | Positive | 334159 - 334461 | 10957.3 |
| hypothetical protein | ATN00_RS01815 | Not Available | Negative | 334667 - 335563 | 28264.7 |
| s8 family serine peptidase | ATN00_RS01820 | Not Available | Negative | 335652 - 336893 | 42313.9 |
| rna polymerase sigma factor | ATN00_RS01825 | B3Q6P8 | Positive | 336976 - 337476 | 18501.3 |
| anti-sigma factor | ATN00_RS01830 | Not Available | Positive | 337473 - 338180 | 25196.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

