Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbl | ATN00_RS01735 | Not Available | Negative | 319442 - 320761 | 44420.0 |
| p-type conjugative transfer protein trbj | ATN00_RS01740 | Not Available | Negative | 320787 - 321512 | 26738.1 |
| conjugal transfer protein trbe | ATN00_RS01745 | Not Available | Negative | 321512 - 323977 | 90970.8 |
| virb3 family type iv secretion system protein | ATN00_RS01750 | Not Available | Negative | 323971 - 324258 | 9996.37 |
| trbc/virb2 family protein | ATN00_RS01755 | Not Available | Negative | 324258 - 324590 | 11471.4 |
| p-type conjugative transfer atpase trbb | ATN00_RS01760 | Not Available | Negative | 324596 - 325573 | 34606.1 |
| copg family transcriptional regulator | ATN00_RS01765 | Not Available | Negative | 325570 - 325974 | 14972.9 |
| conjugal transfer protein trag | ATN00_RS01770 | Not Available | Negative | 325991 - 328045 | 75682.2 |
| duf1778 domain-containing protein | ATN00_RS01775 | Not Available | Positive | 328257 - 328559 | 11045.2 |
| gnat family n-acetyltransferase | ATN00_RS01780 | Not Available | Positive | 328563 - 329072 | 17941.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

