Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mth938-like domain-containing protein | ATN00_RS01585 | Not Available | Negative | 292128 - 292466 | 12162.8 |
| protein translocase subunit secf | ATN00_RS01590 | O33568 | Negative | 292523 - 293506 | 35661.1 |
| protein translocase subunit secd | ATN00_RS01595 | Q92H77 | Negative | 293525 - 295123 | 56893.3 |
| preprotein translocase subunit yajc | ATN00_RS01600 | Q2YNM1 | Negative | 295131 - 295466 | 11921.9 |
| Trna-pro | Not Available | Not Available | Positive | 295661 - 295737 | Not Available |
| glycoside hydrolase family 108 protein | ATN00_RS01610 | Not Available | Positive | 295884 - 296423 | 19529.3 |
| 3tm-type holin | ATN00_RS01615 | Not Available | Positive | 296435 - 296707 | 10087.4 |
| transposase | ATN00_RS01620 | Not Available | Positive | 296777 - 298141 | 50390.6 |
| duf2155 domain-containing protein | ATN00_RS01630 | Not Available | Positive | 299193 - 300194 | 38606.1 |
| glutathione s-transferase family protein | ATN00_RS01635 | Not Available | Negative | 300457 - 301107 | 24474.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

