Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ssra-binding protein smpb | ATN00_RS01295 | Q7X2N6 | Negative | 247135 - 247617 | 18708.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | ATN00_RS01300 | A5V3L9 | Negative | 247666 - 248544 | 30940.9 |
| lytic transglycosylase domain-containing protein | ATN00_RS01305 | Not Available | Positive | 248693 - 250741 | 73658.5 |
| transcription elongation factor greb | ATN00_RS01310 | Q9K0C5 | Positive | 250762 - 251244 | 17764.1 |
| yfir family protein | ATN00_RS01315 | P64549 | Positive | 251380 - 251922 | 19384.7 |
| diguanylate cyclase domain-containing protein | ATN00_RS01320 | P38097 | Positive | 251926 - 253146 | 43662.2 |
| ompa family protein | ATN00_RS01325 | P07021 | Positive | 253139 - 253696 | 19778.6 |
| methyl-accepting chemotaxis protein | ATN00_RS01330 | Not Available | Negative | 253708 - 254826 | 38641.8 |
| hypothetical protein | ATN00_RS23865 | Not Available | Negative | 254860 - 255021 | 5615.77 |
| polyphosphate kinase 2 family protein | ATN00_RS01335 | Q886D9 | Negative | 255095 - 255889 | 30832.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

