Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribbon-helix-helix domain-containing protein | ATN00_RS01200 | Not Available | Negative | 228786 - 229031 | 9012.76 |
| ti-type conjugative transfer relaxase traa | ATN00_RS01205 | Not Available | Negative | 229094 - 232255 | 116072.0 |
| conjugal transfer protein trad | ATN00_RS01210 | Not Available | Positive | 232429 - 232677 | 8947.72 |
| conjugal transfer protein trad | ATN00_RS01215 | Not Available | Positive | 232772 - 233002 | 8416.99 |
| aaa family atpase | ATN00_RS01220 | Not Available | Positive | 232995 - 233549 | 20731.0 |
| hypothetical protein | ATN00_RS01225 | Not Available | Positive | 233542 - 233805 | 9783.77 |
| type iv secretory system conjugative dna transfer family protein | ATN00_RS01230 | Q00184 | Positive | 233807 - 235471 | 60252.4 |
| recombinase family protein | ATN00_RS01235 | Not Available | Negative | 236572 - 237540 | 35758.8 |
| tn3 family transposase | ATN00_RS01240 | Not Available | Negative | 237581 - 240490 | 109016.0 |
| replication initiator protein a | ATN00_RS01245 | P60119 | Positive | 240622 - 241620 | 37992.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

