Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copg family ribbon-helix-helix protein | ATN00_RS01105 | Not Available | Positive | 219517 - 219795 | 10686.6 |
| type ii toxin-antitoxin system rele/pare family toxin | ATN00_RS01110 | Not Available | Positive | 219783 - 220076 | 10975.1 |
| duf2155 domain-containing protein | ATN00_RS23270 | Not Available | Positive | 220095 - 220190 | 3513.2 |
| wgr domain-containing protein | ATN00_RS22680 | Not Available | Negative | 220205 - 220486 | 10301.5 |
| duf2384 domain-containing protein | ATN00_RS01125 | Not Available | Negative | 220923 - 222296 | 50453.1 |
| duf2155 domain-containing protein | ATN00_RS24270 | Not Available | Negative | 222348 - 222410 | 2025.49 |
| duf2155 domain-containing protein | ATN00_RS23860 | Not Available | Negative | 222489 - 222755 | 9817.63 |
| tyrosine-type recombinase/integrase | ATN00_RS01135 | Not Available | Negative | 222777 - 223739 | 35117.4 |
| hypothetical protein | ATN00_RS01140 | Not Available | Negative | 223736 - 224107 | 14189.4 |
| hypothetical protein | ATN00_RS01145 | Not Available | Negative | 224141 - 224506 | 13147.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

