Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATN00_RS22315 | Not Available | Positive | 34060 - 34344 | 10015.0 |
| hepn domain-containing protein | ATN00_RS22320 | Not Available | Positive | 34341 - 35276 | 35378.2 |
| simpl domain-containing protein | ATN00_RS22325 | Not Available | Positive | 35273 - 35989 | 24461.2 |
| type iv secretory system conjugative dna transfer family protein | ATN00_RS22330 | Q00184 | Positive | 35996 - 37657 | 60200.3 |
| hypothetical protein | ATN00_RS22335 | Not Available | Positive | 37695 - 38156 | 17051.3 |
| replication initiator protein a | ATN00_RS22345 | P60119 | Positive | 39213 - 40316 | 42276.5 |
| ribbon-helix-helix domain-containing protein | ATN00_RS22350 | Not Available | Negative | 40345 - 40629 | 9671.58 |
| aaa family atpase | ATN00_RS22355 | Not Available | Negative | 40629 - 41264 | 22425.9 |
| transcription elongation protein sprt | ATN00_RS22360 | Not Available | Negative | 41386 - 42018 | 22477.0 |
| type ii toxin-antitoxin system rele/pare family toxin | ATN00_RS22365 | Not Available | Positive | 42437 - 42760 | 12262.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

