Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombinase reca | ATN00_RS00700 | Q9X5D8 | Negative | 142052 - 143125 | 38292.1 |
| response regulator | ATN00_RS00705 | Not Available | Negative | 143225 - 143584 | 12747.3 |
| duf2155 domain-containing protein | ATN00_RS00710 | P0DOA0 | Negative | 143667 - 145220 | 55230.5 |
| is6-like element is6100 family transposase | ATN00_RS00715 | Not Available | Negative | 145276 - 146040 | 29684.0 |
| duf2155 domain-containing protein | ATN00_RS00720 | Q9R2W4 | Negative | 146102 - 147316 | 45523.7 |
| type iv secretion system protein virb3 | ATN00_RS00725 | Q9S3N1 | Negative | 147309 - 147632 | 11575.5 |
| trbc/virb2 family protein | ATN00_RS00730 | Not Available | Negative | 147714 - 148079 | 12627.9 |
| lytic transglycosylase domain-containing protein | ATN00_RS00735 | P17791 | Negative | 148076 - 148789 | 24642.3 |
| hypothetical protein | ATN00_RS23250 | Not Available | Negative | 148995 - 149282 | 10943.3 |
| toprim domain-containing protein | ATN00_RS00745 | Not Available | Positive | 149375 - 150259 | 31702.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

