Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| merc domain-containing protein | ATN00_RS00650 | Not Available | Negative | 127244 - 127621 | 12691.9 |
| diguanylate cyclase | ATN00_RS00655 | Not Available | Negative | 127710 - 129485 | 63999.6 |
| catalase | ATN00_RS00660 | P0A327 | Negative | 129602 - 131101 | 56400.2 |
| glycerol kinase glpk | ATN00_RS00665 | Q2RST6 | Negative | 131201 - 132667 | 52201.3 |
| glycerol-3-phosphate dehydrogenase | ATN00_RS00670 | Q2YIQ2 | Negative | 132664 - 134172 | 55818.5 |
| atp-dependent clp protease adapter clps | ATN00_RS00675 | B6INJ3 | Negative | 134324 - 134704 | 14198.1 |
| error-prone dna polymerase | ATN00_RS00680 | Q57FU7 | Negative | 134877 - 138350 | 128030.0 |
| dna polymerase y family protein | ATN00_RS00685 | Not Available | Negative | 138347 - 139951 | 59096.1 |
| imua family protein | ATN00_RS00690 | Not Available | Negative | 139839 - 140654 | 28706.5 |
| transglutaminase family protein | ATN00_RS00695 | Not Available | Negative | 140737 - 141516 | 28257.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

